Sequence
atgc intronic sequence ATGC exonic sequence...gcatcattgtctagagctttgatatatcttcatgggaagcatgttatccgtaggaaccaaatatgtcattttatccattgccatatgctatcttttttagCTCCTGAATGTTCTACGGAGAGAGCTAGGTGAAGTTGAAAAGAACAAAGACACTTTCTTGGCAGACTTCACAAAG
Basic information
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.atccgtaggaaccaaatatgtcattttatccattgccatatgctatcttttttagCTCCTGAATGTTCTACGGAGAGAGCTAGGTGAAGTTGAAAAGAACAAAGACACTTTCTTGGCAGACTTCACAAAG
ctatctttttt CT-rich tract
aaatatgtcattttat TA-rich tract
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
gcatcattgtctagagctttgatatatcttcatgggaagcatgttatccgtaggaaccaaatatgtcattttatccattgccatatgctatcttttttagCTCCTGAATGTTCTACGGAGAGAGCTAGGTGAAGTTGAAAAGAACAAAGACACTTTCTTGGCAGACTTCACAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - -cttcatg
- - - - - - - - - - - - - - - - - - aagcatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - aaccaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -catatgc