1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TGCTCTAGATGAAACAACTGGAGATGCAATACCAGAAAAGCTGGTAAAGGCACTAAATGCTTCTCGGAACATGTTTCCTGCTACTGAGCTCCAGAGGCAGgtatgtttttcgttgtagttcttaggctgtctccaacaatagccggtaaattgttctgtccgctacatatagcgttttcttccgtcctggctccgcccaa...
species | Zea mays |
transcript | GRMZM2G450659_T01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: GTTTCCTGCTACTGAGCTCCAGAGGCAG ATCTTCTACTCTATAATGGACCTAACCTTGTTTGGCGAGCAATCATCCAAGEST: gi|31354813|gb|CD439170.1|CD439170
genomic: GTTTCCTGCTACTGAGCTCCAGAGGCAGgtatgttttt ... cctttcccagATCTTCTACTCTATAATGGACCTAACCTTGTTTGGCGAGCAATCATCCAAG
EST: CACTAAATGCTTCTCGGAACATGTTTCCTGCTACTGAGCTCCAGAGGCAG ATCTTCTACTCTATAATGGACCTAACCTTGTTTGGCGAGCAATCATCCAAGEST: gi|67025011|gb|CO453760.1|CO453760
genomic: CACTAAATGCTTCTCGGAACATGTTTCCTGCTACTGAGCTCCAGAGGCAGgtatgttttt ... cctttcccagATCTTCTACTCTATAATGGACCTAACCTTGTTTGGCGAGCAATCATCCAAG
EST: GAGCTCCTGACGCAG ATCTTCTACTCTATAATGGACCTAACCTTGTTTGGCGAGCAATCATCCAAG
genomic: GAGCTCCAGAGGCAGgtatgttttt ... cctttcccagATCTTCTACTCTATAATGGACCTAACCTTGTTTGGCGAGCAATCATCCAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCTCTAGATGAAACAACTGGAGATGCAATACCAGAAAAGCTGGTAAAGGCACTAAATGCTTCTCGGAACATGTTTCCTGCTACTGAGCTCCAGAGGCAGgtatgtttttcgttgtagttcttaggctgtctccaacaatagccggtaaattgttctgtccgctacatatagcgttttcttccgtcctggctccgcccaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccgcc