1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...tgtgacaacatctaaaaagtgattgatatgctagtattcatgttttagtatatgtactatcatgaagtgctagactgacaagggattgatctactttcagGTTCCATCAAAAGTTATTGGTGTTGTTTTAGCAAGTCAACTAGGAAAAGAATAG
species | Zea mays |
transcript | GRMZM2G444376_T01 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
tagtatatgtactatcatgaagtgctagactgacaagggattgatctactttcagGTTCCATCAAAAGTTATTGGTGTTGTTTTAGCAAGTCAACTAGGAAAAGAATAG
tctactttc CT-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgtgacaacatctaaaaagtgattgatatgctagtattcatgttttagtatatgtactatcatgaagtgctagactgacaagggattgatctactttcagGTTCCATCAAAAGTTATTGGTGTTGTTTTAGCAAGTCAACTAGGAAAAGAATAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- -gacaaca
- - - - - - - - - gtgattg
- - - - - - - - - - - - - - tgctagt
- - - - - - - - - - - - - - - - - -attcatg
- - - - - - - - - - - - - - - - - - - - - - - - -atatgta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - catgaag