1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCATATGTGCAGCAGCTGGAGAGCAGTAAGCTGAAACTTGCACAACTGGAACAGGAACTCCAGAAAGCTCGCCAGCAGgtaactctgtcttggatgcatgtacatttacggagtgcttggaaaatagtacctttgtgctgttattttgactctttgaatgttacgctttcag
species | Zea mays |
transcript | GRMZM2G361847_T07 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGCTGAAACTTGCACAACTGGAACAGGAACTCCAGAAAGCTCGCCAGCAG GGAATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATEST: gi|211145673|gb|FL260532.1|FL260532
genomic: AGCTGAAACTTGCACAACTGGAACAGGAACTCCAGAAAGCTCGCCAGCAGgtaactctgt ... acgctttcagGGAATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAAT
EST: AGCTGAAACTTGCACAACTGGAACAGGAACTCCAGAAAGCTCGCCAGCAG GGAATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATEST: gi|91057217|gb|EB167635.1|EB167635
genomic: AGCTGAAACTTGCACAACTGGAACAGGAACTCCAGAAAGCTCGCCAGCAGgtaactctgt ... acgctttcagGGAATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAAT
EST: AGCTGAAACTTGCACAACTGGAACAGGAACTCCAGAAAGCTCGCCAGCAG GGAATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAAT
genomic: AGCTGAAACTTGCACAACTGGAACAGGAACTCCAGAAAGCTCGCCAGCAGgtaactctgt ... acgctttcagGGAATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCATATGTGCAGCAGCTGGAGAGCAGTAAGCTGAAACTTGCACAACTGGAACAGGAACTCCAGAAAGCTCGCCAGCAGgtaactctgtcttggatgcatgtacatttacggagtgcttggaaaatagtacctttgtgctgttattttgactctttgaatgttacgctttcag
- - - - - - - - - - - - - - AGCTGA