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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGCAGTCGACCGCCGCAGACCGGGAGTAGTCGACGCGCCGTCACTGAATCCTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgacgcatgcgcgagcgcttctcttcttctcttttcgctgtgcttttagtctgttcgtttgatgcccagatctactaggtttgtgtgatgagcc...

Basic information

species Zea mays
transcript GRMZM2G343543_T04
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32908860|gb|CF013673.1|CF013673
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211236537|gb|FL179777.1|FL179777
EST:     CTCAGATCACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32943524|gb|CF048343.1|CF048343
EST:     CTCAGATCAGGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|33093746|gb|CF053740.1|CF053740
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211063514|gb|FL179770.1|FL179770
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32830602|gb|CD970280.1|CD970280
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211241010|gb|FL179802.1|FL179802
EST:     CTCAGATCACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32931600|gb|CF036412.1|CF036412
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|33095217|gb|CF055211.1|CF055211
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211238772|gb|FL179790.1|FL179790
EST:     CTCAGATCACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211063504|gb|FL179760.1|FL179760
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|33094137|gb|CF054131.1|CF054131
EST:     CTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211236541|gb|FL179781.1|FL179781
EST:     CTCAGATCACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|31405637|gb|CD484369.1|CD484369
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|31405637|gb|CD484369.1|CD484369
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|31405637|gb|CD484369.1|CD484369
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|211238769|gb|FL179787.1|FL179787
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32916620|gb|CF021432.1|CF021432
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211236534|gb|FL179774.1|FL179774
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|26557363|gb|CA829598.1|CA829598
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|26557363|gb|CA829598.1|CA829598
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|26557363|gb|CA829598.1|CA829598
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|211063511|gb|FL179767.1|FL179767
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211063508|gb|FL179764.1|FL179764
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|29167742|gb|CB411002.1|CB411002
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|29167742|gb|CB411002.1|CB411002
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|29167742|gb|CB411002.1|CB411002
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|14202731|gb|BG836408.1|BG836408
EST:     CAGATCACGGCTAGCCGTAATCACACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CAGATCACGGCTAGCCGTAAT--CACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32912731|gb|CF017543.1|CF017543
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|6536606|gb|AW224919.1|AW224919
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|9952771|gb|BE639354.1|BE639354
EST:     GCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: GCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32907113|gb|CF011926.1|CF011926
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211236536|gb|FL179776.1|FL179776
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211063510|gb|FL179766.1|FL179766
EST:     CTCAGATCACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211236542|gb|FL179782.1|FL179782
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|6012301|gb|AW061657.1|AW061657
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         TGTAACATTTTCCTTCAGCCATGGGCAAGGAGAAGACTCACATCAACATTG
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcagTGTAACATTTTCCTTCAGCCATGGGCAAGGAGAAGACTCACATCAACATTG
EST: gi|211238771|gb|FL179789.1|FL179789
EST:     CTCAGATCACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211236540|gb|FL179780.1|FL179780
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211060521|gb|FL179755.1|FL179755
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|29130587|gb|CB381291.1|CB381291
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|29130587|gb|CB381291.1|CB381291
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|29130587|gb|CB381291.1|CB381291
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|32906906|gb|CF011719.1|CF011719
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32863883|gb|CF003565.1|CF003565
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211236538|gb|FL179778.1|FL179778
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211060522|gb|FL179756.1|FL179756
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211063509|gb|FL179765.1|FL179765
EST:     CTCAGATCACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32908691|gb|CF013504.1|CF013504
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32943193|gb|CF048012.1|CF048012
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32907980|gb|CF012793.1|CF012793
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|6021320|gb|AW066248.1|AW066248
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211063515|gb|FL179771.1|FL179771
EST:     CTCAGATCACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211063503|gb|FL179759.1|FL179759
EST:     AGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTSCCGGCGAGCAG                         TGTAACATTTTCCTTCAGCCATGGGCAAGGAGAAGACTCACATCAACATT
genomic: AGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagcagTGTAACATTTTCCTTCAGCCATGGGCAAGGAGAAGACTCACATCAACATT
EST: gi|211236544|gb|FL179784.1|FL179784
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|33094195|gb|CF054189.1|CF054189
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211063505|gb|FL179761.1|FL179761
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211241011|gb|FL179803.1|FL179803
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32945383|gb|CF050202.1|CF050202
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32943328|gb|CF048147.1|CF048147
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211063506|gb|FL179762.1|FL179762
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|30307009|gb|CD001682.1|CD001682
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|30307009|gb|CD001682.1|CD001682
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|30307009|gb|CD001682.1|CD001682
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAG                         C
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|29577187|gb|CB617299.1|CB617299
EST:     TCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCNGAG                         -GTAACATTTTCCTTCAGCCATGGGCAAGGAGAAGACTCACATCAACATT
genomic: TCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC-GAGgtactctgac ... taagcagcagTGTAACATTTTCCTTCAGCCATGGGCAAGGAGAAGACTCACATCAACATT
EST: gi|60401470|gb|DN234277.1|DN234277
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211238774|gb|FL179792.1|FL179792
EST:     CTCAGATCACGGCTAGCCGTAAYCACGACACTCTGCKGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211236545|gb|FL179785.1|FL179785
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211238775|gb|FL179793.1|FL179793
EST:     CTCAGATCACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211236532|gb|FL179772.1|FL179772
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|20301118|gb|BQ164061.1|BQ164061
EST:     CTGCTGACTCCCGGCGAGCAG                       
genomic: CTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211238782|gb|FL179800.1|FL179800
EST:     CTCAGATCACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211238778|gb|FL179796.1|FL179796
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|60347413|gb|DN214386.1|DN214386
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32907361|gb|CF012174.1|CF012174
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211063507|gb|FL179763.1|FL179763
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|211236543|gb|FL179783.1|FL179783
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|32867191|gb|CF006873.1|CF006873
EST:     CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGCAG                       
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGC--G-AGgtactctgac ... taagcagc
EST: gi|67020503|gb|CO449252.1|CO449252
EST:     CTCAGA-CACGGCTAGCCGTAATCACGACACTCTGCTGACTCCCGGCGAG                         TGTAACATTTTCCTTCAGCCATGGGCAAGGAGAAGACTCACATCAACATTG
genomic: CTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgac ... taagcagcagTGTAACATTTTCCTTCAGCCATGGGCAAGGAGAAGACTCACATCAACATTG
EST: gi|29576937|gb|CB617049.1|CB617049
EST:     ACTCCCGGCGAG                         C
genomic: ACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|29576937|gb|CB617049.1|CB617049
EST:     ACTCCCGGCGAG                         C
genomic: ACTCCCGGCGAGgtactctgac ... taagcagcag-
EST: gi|29576937|gb|CB617049.1|CB617049
EST:     ACTCCCGGCGAG                         C
genomic: ACTCCCGGCGAGgtactctgac ... taagcagcag-

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CGCAGTCGACCGCCGCAGACCGGGAGTAGTCGACGCGCCGTCACTGAATCCTCAGATCACGGCTAGCCGTAATCACGCCACTCTGCTGACTCCCGGCGAGgtactctgacgcatgcgcgagcgcttctcttcttctcttttcgctgtgcttttagtctgttcgtttgatgcccagatctactaggtttgtgtgatgagcc

- - - - - - - - - - - - - - - - - - - - - - - - - -  AGATCA