Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...catgaattgcatccctaggacccatacatatgaaagcgctactattgtaaccgtgagatgatctgatggctggtttggcgacgacgacgtcttggtgcagGTGGAGCTGCTATTTATGGAGAGGAGCGTTGATAGTCATTGTCCTGGGATGGTAGTCCGCATGGCTGAACGTTAGTCATAATTTGTGTTGTAGTATAATT

Basic information

species Zea mays
transcript GRMZM2G167308_T01
intron # 4
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161582390|gb|EY957215.1|EY957215
EST:     TTCTTCGAGACAATGCAAAAGTGGTTCGTGTTGATGCTGCCAATATCAAA                         GTGGAGCTGCTATTTATGG
genomic: TTCTTCGAGACAATGCAAAAGTGGTTCGTGTTGATGCTGCCAATATCAAAgtaagtattg ... cttggtgcagGTGGAGCTGCTATTTATGG
EST: gi|5608249|gb|AI901916.1|AI901916
EST:     TTCTTCGAGACAATGCAAAAGTGGTTCGTGTTGATGCTGCCAATATCAAA                         GTGGAGCTGCTATTTATGGAGAGGAGCGTTGATAGTCATTGTCCTGGGATG
genomic: TTCTTCGAGACAATGCAAAAGTGGTTCGTGTTGATGCTGCCAATATCAAAgtaagtattg ... cttggtgcagGTGGAGCTGCTATTTATGGAGAGGAGCGTTGATAGTCATTGTCCTGGGATG