1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTTGTGGAGGATGGAAAAGAGAGATTAGTAGTTGGTAGTTTAGACCTTAATCAGTGTCTTTGGCTACCAGATGAATTGACTGGAAAGAGGCCTGGGgtacgaccgttgtttcctctttctacgctattgcagaatacttatgatcaaaacatatttttgatagttgttattggtatttttgaacttgctttggtca...
species | Zea mays |
transcript | GRMZM2G137715_T03 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTAATCAGTGTCTTTGGCT-TCTTATGAATTGACTGGAAAGAGGCCTGGG GTAAATGAAGACATCCAGACAAGAGCATATCTAAGCAATGTCTGTGTTGCCEST: gi|60336989|gb|DN203962.1|DN203962
genomic: TTAATCAGTGTCTTTGGCTACCAGATGAATTGACTGGAAAGAGGCCTGGGgtacgaccgt ... ttgccaatagGTAAATGAAGACATCCAGACAAGAGCATATCTAAGCAATGTCTGTGTTGCC
EST: TTAATCAGTGTCTTTGGCTACCAGATGAATTGACTGGAAAGAGGCCTGGG GTAAATGAAGACATCCAGACAAGAGCATATCTAAGCAATGTCTGTGTTGCC
genomic: TTAATCAGTGTCTTTGGCTACCAGATGAATTGACTGGAAAGAGGCCTGGGgtacgaccgt ... ttgccaatagGTAAATGAAGACATCCAGACAAGAGCATATCTAAGCAATGTCTGTGTTGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTGTGGAGGATGGAAAAGAGAGATTAGTAGTTGGTAGTTTAGACCTTAATCAGTGTCTTTGGCTACCAGATGAATTGACTGGAAAGAGGCCTGGGgtacgaccgttgtttcctctttctacgctattgcagaatacttatgatcaaaacatatttttgatagttgttattggtatttttgaacttgctttggtca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaacata