1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ATGGCACATTATCAAGGATGTTCCCAATCCACAATTTCGCCATATAATTTTGGAGAATAATGAGAATAAACCTGTGACAAACAGCAGGGACACACAAGAGgtattccttccaatacctagcaagagttcttggtattttttatgacaagtggttgagctttctaagttaattctcatttcatggcaatatatgtcaggaa...
species | Zea mays |
transcript | GRMZM2G127780_T02 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TGGAGAATAATGAGAATAAACCTGTGACAAACAGCAGGGACACACAAGAG GTCAAATTTTCACAAGGTACAGAGATGTTGAACATTTTCAAGAACTTCGCAEST: gi|6021642|gb|AW066570.1|AW066570
genomic: TGGAGAATAATGAGAATAAACCTGTGACAAACAGCAGGGACACACAAGAGgtattccttc ... tcaaatccagGTCAATTTTTCACAAGGTACAGAGATGTTGAACATTTTCAAGAACTTCACA
EST: GNAGNAATAATGAGAATAAACCTGTGACAAACAGCAGGGACACACAAGAG GTCAATTTTTCACAAGGTACAGAGATGTTGAACATTTTCAAGAACTTCACA
genomic: G-AG-AATAATGAGAATAAACCTGTGACAAACAGCAGGGACACACAAGAGgtattccttc ... tcaaatccagGTCAATTTTTCACAAGGTACAGAGATGTTGAACATTTTCAAGAACTTCACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGCACATTATCAAGGATGTTCCCAATCCACAATTTCGCCATATAATTTTGGAGAATAATGAGAATAAACCTGTGACAAACAGCAGGGACACACAAGAGgtattccttccaatacctagcaagagttcttggtattttttatgacaagtggttgagctttctaagttaattctcatttcatggcaatatatgtcaggaa
- - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA