1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTCGGCGAGCACTTCCCGGCGCCGGTCTACTTCTCCCTCCTCCCGATCATCGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgacacggaaatccggccccatctcctgagcctcggaaatactcatgctgctgatacacgagaaatatcgatcagagggattgtgtgtaattctt...
species | Zea mays |
transcript | GRMZM2G125850_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCTEST: gi|27753886|gb|BM378078.1|BM378078
genomic: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cacgctgtagGGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCT
EST: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCTEST: gi|24934556|gb|CA452774.1|CA452774
genomic: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cacgctgtagGGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCT
EST: TGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCTEST: gi|50335221|gb|CO530347.1|CO530347
genomic: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cacgctgtagGGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCT
EST: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCTEST: gi|93282359|gb|EB674623.1|EB674623
genomic: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cacgctgtagGGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCT
EST: GCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCCTCTEST: gi|71770113|gb|DR968050.1|DR968050
genomic: GCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cacgctgtagGGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCT
EST: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCTEST: gi|89249586|gb|DY621372.1|DY621372
genomic: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cacgctgtagGGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCT
EST: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCT
genomic: CGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cacgctgtagGGTTCATGGGGGCAATGATCTCGAACCTGGCGTTCGTCGTCCGGACCATCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCGGCGAGCACTTCCCGGCGCCGGTCTACTTCTCCCTCCTCCCGATCATCGGTGGGTGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgacacggaaatccggccccatctcctgagcctcggaaatactcatgctgctgatacacgagaaatatcgatcagagggattgtgtgtaattctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccggccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gagaaata