Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211113214|gb|FL210560.1|FL210560EST: ACTCCAACAAGGAGATCTTCCTCCGCGAGCTTATCTCCAACTC-T----T CAGCAGAACAAGATCCTGAAGGTGATCAGGAAGAACCTTGTGAAGAAGTGT
genomic: ACTCCAACAAGGAGATCTTCCTCCGCGAGCTTATCTCCAACTCTTCCGATgtaagtgacc ... tgagactcttCAGCAGAACAAGATCCTGAAGGTGATCAGGAAGAACCTTGTGAAGAAGTGT
EST:
gi|211517035|gb|FL210556.1|FL210556EST: ACTCCAACAAGGAGATCTTCCTCCGCGAGCTTATCTCCAACTC-T----T CAGCAGAACAAGATCCTGAAGGTGATCAGGAAGAACCTTGTGAAGAAGTGT
genomic: ACTCCAACAAGGAGATCTTCCTCCGCGAGCTTATCTCCAACTCTTCCGATgtaagtgacc ... tgagactcttCAGCAGAACAAGATCCTGAAGGTGATCAGGAAGAACCTTGTGAAGAAGTGT
EST:
gi|211517036|gb|FL210557.1|FL210557EST: ACTCCAACAAGGAGATCTTCCTCCGCGAGCTTATCTCCAACTC-T----T CAGCAGAACAAGATCCTGAAGGTGATCAGGAAGAACCTTGTGAAGAAGTGT
genomic: ACTCCAACAAGGAGATCTTCCTCCGCGAGCTTATCTCCAACTCTTCCGATgtaagtgacc ... tgagactcttCAGCAGAACAAGATCCTGAAGGTGATCAGGAAGAACCTTGTGAAGAAGTGT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATTTCAGGCTGAGATCAACCAGCTGCTCTCACTCATCATCAACACCTTCTACTCCAACAAGGAGATCTTCCTCCGCGAGCTTATCTCCAACTCTTCCGATgtaagtgaccccgtttaagtcgaaatctagacgcatttcagtgcgctattagtgatataggttggatgccttactgtttgggcgacgacttgtgctatgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT