Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGCCGTCACCGCCGCCAAGCTGGCCCACGTCCTCTCCTTTGCCACCTCCTGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctcccggctctaatagccccatctttctccccccgtcatcttgccccaatctatgaaccaaaaatcgtgaggggaaaatctaatccaagaattccatggattcattgaactgaaccgctactttgttctgtggtgatgtggaaatcttgttctttgtag

Basic information

species Zea mays
transcript GRMZM2G106906_T01
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G106906_T01 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os12g37060.1 (Oryza sativa), 5'ss of exon 1
GAGCCGTCACCGCCGCCAAGCTGGCCCACGTCCTCTCCTTTGCCACCTCCTGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctcccggctctaatagccccatctttctccccccgtcatcttgccccaatctatgaaccaaaaat-cgtgaggggaaaatctaatccaag---aattccatggattcattgaactgaaccgctactttgttctgtggtgatgtggaaatcttgttctttgtag
| |||| | | ||||||||| |||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| | | | |  |||  | |  ||        | |     |  | |  ||| | || | ||||| | | | | | |      |   || | |||     || | |  | |  |||  | || |    |  || |||   | ||| ||   |                 
GCGCCGCCGCGGCCGCCAAGGTGGCCCACCTCCTCTGCTTCGCCACCTCATGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATCATGTTCAAgtaatcccaccactcccaaaaaccttggggagttcttgatttttttcccccaattccaagaacccagattgcttcaaatctgagattacttcaaatctgatccgagagttggattcgattggatgaatggtt-gtttgtttgtgttggaaag----------------

upper sequence: GRMZM2G106906_T01 (Zea mays), 5'ss of exon 1
lower sequence: Vv07s0005g01250.t01 (Vitis vinifera), 5'ss of exon 1
GAGCCG-TCACCGCCGCCAAGCTGGCCCACGTCCTCTCCTTTGCCACCTCCTGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctcccggctctaat-agccccatctttctccccccgtcatcttgccccaatctatgaaccaaaaatcgtgaggggaaaatctaatccaagaattccatggattcattgaactgaaccgctactttgttc---tgtggtgatgtggaaatcttgttctttgtag-
 |||    | | |||  ||| || || ||| | |||| ||| |||||| | ||||||||||| ||||||| |||||||||||||||||||||||||||||||| |     |   || |   |       || |    | | ||    |||||   |      || | |      |       |||| | |||     |    | |||   | || |  |  || |||  || ||    |||  ||||   ||| | |  |  |   |   
-AGCTAACCGCTGCCCTCAAACTCGCTCACCTGCTCTGCTTCGCCACCGCTTGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattcttttcgacccaattttgcctgttgtgctcggtttgtttgccgaga-----aaatctaggtcattttttcccaaattttatc-ggcgaccaaagggaggtactggatagttcctctaaattttttaattgttatgattgagaagtataatgatgactcag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211257857|gb|FL107117.1|FL107117
EST:     TGGGGCGCCGCC-TCTGGGSCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252963|gb|FL107078.1|FL107078
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252961|gb|FL107076.1|FL107076
EST:     TGGGGCGCCGCCTTCTGGGSCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAANATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211058521|gb|FL107054.1|FL107054
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|93016863|gb|EB642383.1|EB642383
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255413|gb|FL107102.1|FL107102
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252970|gb|FL107085.1|FL107085
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|71323169|gb|DR798252.1|DR798252
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|71298304|gb|DR785130.1|DR785130
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211260287|gb|FL107126.1|FL107126
EST:     TGGGGCGCCGCC-TCTGGGSCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061481|gb|FL107066.1|FL107066
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257848|gb|FL107108.1|FL107108
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252968|gb|FL107083.1|FL107083
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061489|gb|FL107074.1|FL107074
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257859|gb|FL107119.1|FL107119
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211157314|gb|FK993526.1|FK993526
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATAATAATGTTCAN                         GAACCTGCCGAGGCACATGT
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGT
EST: gi|148996155|gb|EE035425.2|EE035425
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211260282|gb|FL107121.1|FL107121
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257854|gb|FL107114.1|FL107114
EST:     TGGGGCGCCGCC-TCTGGGSCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061478|gb|FL107063.1|FL107063
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061483|gb|FL107068.1|FL107068
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGGCA-CTTGCAGAGCAAGATGTTCCCGG
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGG-CAACTTGCAGAGCAAGATGTTCCCGG
EST: gi|211058525|gb|FL107058.1|FL107058
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211260291|gb|FL107130.1|FL107130
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257855|gb|FL107115.1|FL107115
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255404|gb|FL107093.1|FL107093
EST:     TGGGGCGCCGCC-TCTGGGSCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|37386748|gb|CF630563.1|CF630563
EST:     TCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211058524|gb|FL107057.1|FL107057
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061484|gb|FL107069.1|FL107069
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255414|gb|FL107103.1|FL107103
EST:     TGGGGCGCCGCC-TCTGGGSCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257847|gb|FL107107.1|FL107107
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|148980421|gb|EE027132.2|EE027132
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211157315|gb|FK993527.1|FK993527
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATAATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTG
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTG
EST: gi|76923733|gb|DV169631.1|DV169631
EST:     GGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: GGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252964|gb|FL107079.1|FL107079
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|71298305|gb|DR785131.1|DR785131
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061476|gb|FL107061.1|FL107061
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|5740092|gb|AI947782.1|AI947782
EST:     TTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257851|gb|FL107111.1|FL107111
EST:     TGGGGCGCCGCC-TCTGGGSCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAAC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAAC
EST: gi|71323167|gb|DR798251.1|DR798251
EST:     GGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: -GGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252969|gb|FL107084.1|FL107084
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|76923734|gb|DV169632.1|DV169632
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252962|gb|FL107077.1|FL107077
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061480|gb|FL107065.1|FL107065
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061479|gb|FL107064.1|FL107064
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211260286|gb|FL107125.1|FL107125
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252973|gb|FL107088.1|FL107088
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255401|gb|FL107090.1|FL107090
EST:     TGGGGCGCCGCC-TCTGGGSCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATTGTTCCCGG
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGAT-GTTCCCGG
EST: gi|211260283|gb|FL107122.1|FL107122
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255411|gb|FL107100.1|FL107100
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAA-ATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255408|gb|FL107097.1|FL107097
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATAATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252971|gb|FL107086.1|FL107086
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211058519|gb|FL107052.1|FL107052
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061487|gb|FL107072.1|FL107072
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAANATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257850|gb|FL107110.1|FL107110
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|148966841|gb|EE017947.2|EE017947
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|101382833|gb|EB813471.1|EB813471
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|149105321|gb|EE290815.2|EE290815
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061477|gb|FL107062.1|FL107062
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATAATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257852|gb|FL107112.1|FL107112
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|67021705|gb|CO450454.1|CO450454
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255406|gb|FL107095.1|FL107095
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|113703253|gb|EE680757.1|EE680757
EST:     GGGGGGCCGCCCTCTGGGCCACTTTCATAGGGCGGCATCATAAAGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: GGGGCGCCGCCCTCTGGGCCACCTTCAT-CGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|7162426|gb|AW520048.1|AW520048
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|71430045|gb|DR811095.1|DR811095
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255415|gb|FL107104.1|FL107104
EST:     TGGGGCGCCGCCTTCTGGGSCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|71774158|gb|DR972038.1|DR972038
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255403|gb|FL107092.1|FL107092
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCA-GATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255405|gb|FL107094.1|FL107094
EST:     TGGGGCGCCGCC-TCTGGSC-ACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGAATGTTCCCGG
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGA-TGTTCCCGG
EST: gi|74233476|gb|DT641390.1|DT641390
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|71305777|gb|DR789027.1|DR789027
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|74244490|gb|DT652404.1|DT652404
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211058520|gb|FL107053.1|FL107053
EST:     GGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: GGGG-CGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|74233477|gb|DT641391.1|DT641391
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257845|gb|FL107105.1|FL107105
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|78107555|gb|DV525973.1|DV525973
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061482|gb|FL107067.1|FL107067
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255409|gb|FL107098.1|FL107098
EST:     GGGGCGCMGCCCTCTGGGCCACCTTCATCGGCGGCATCATKRATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGG
genomic: GGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATA-ATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGG
EST: gi|211061488|gb|FL107073.1|FL107073
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257849|gb|FL107109.1|FL107109
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211260288|gb|FL107127.1|FL107127
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211058522|gb|FL107055.1|FL107055
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|76011236|gb|DT938406.1|DT938406
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|60345536|gb|DN212509.1|DN212509
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|71448162|gb|DR829212.1|DR829212
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|149083802|gb|EE173172.2|EE173172
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|71430044|gb|DR811094.1|DR811094
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255410|gb|FL107099.1|FL107099
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252965|gb|FL107080.1|FL107080
EST:     TGGGGCGSSGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257846|gb|FL107106.1|FL107106
EST:     TGGGGCGCCGCC-TCTGGGSCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211058523|gb|FL107056.1|FL107056
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|28909839|gb|CB331125.1|CB331125
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211260292|gb|FL107131.1|FL107131
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211260285|gb|FL107124.1|FL107124
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252960|gb|FL107075.1|FL107075
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211252967|gb|FL107082.1|FL107082
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211257858|gb|FL107118.1|FL107118
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAAMTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211255407|gb|FL107096.1|FL107096
EST:     TGGGGCGCCGCC-TCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061485|gb|FL107070.1|FL107070
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
EST: gi|211061486|gb|FL107071.1|FL107071
EST:     TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAA                         GAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC
genomic: TGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 383

GAGCCGTCACCGCCGCCAAGCTGGCCCACGTCCTCTCCTTTGCCACCTCCTGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGCCTACTTCACGCTTATATCTGCATGCGCAGCCATCTCCGTCGCCGCCTTC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 526

GAGCCGTCACCGCCGCCAAGCTGGCCCACGTCCTCTCCTTTGCCACCTCCTGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGCCTACTTCACGCTTATATCTGCATGCGCAGCCATCTCCGTCGCCGCCTTC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 431

GAGCCGTCACCGCCGCCAAGCTGGCCCACGTCCTCTCCTTTGCCACCTCCTGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGCCTACTTCACGCTTATATCTGCATGCGCAGCCATCTCCGTCGCCGCCTTC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 559

GAGCCGTCACCGCCGCCAAGCTGGCCCACGTCCTCTCCTTTGCCACCTCCTGGGGCGCCGCCCTCTGGGCCACCTTCATCGGCGGCATCATAATGTTCAAgtgagctccc ... ttctttgtagGAACCTGCCGAGGCACATGTTCGGCAACTTGCAGAGCAAGATGTTCCCGGCCTACTTCACGCTTATATCTGCATGCGCAGCCATCTCCGTCGCCGCCTTC