1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GACTGGCACTTGCCAACGAGAATATGAAAGTCGTGCTGCAGTTAACACTGTAGTTCTGCACCCAAATCAGgttagaatcatttctttcaatatttagttgtatggctttgacttgagtagcacccttttatcctgatttcaaatctccacatgagcgaatttcagattgg...
species | Zea mays |
transcript | GRMZM2G094959_T05 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTGCAGTTAACACTGTAGTTCTGCCCCCAAATCAG AAAGAGCTAATATCTGGTGATCAGAATGGAAACATACGTGTATGGGATTTGEST: gi|211318270|gb|FL106362.1|FL106362
genomic: CTGCAGTTAACACTGTAGTTCTGCACCCAAATCAGgttagaatca ... attttttcagAAAGAGCTAATATCTGGTGATCAGAATGGAAACATACGTGTATGGGATTTG
EST: AATATGAAAGTCGTGCTGCAGTTAACACTGTAGTTCTGCACCCAAATCAG AAAGAGCTAATATCTGGTGATCAGAATGGAAACATACGTGTATGGGATTTGEST: gi|32941525|gb|CF046344.1|CF046344
genomic: AATATGAAAGTCGTGCTGCAGTTAACACTGTAGTTCTGCACCCAAATCAGgttagaatca ... attttttcagAAAGAGCTAATATCTGGTGATCAGAATGGAAACATACGTGTATGGGATTTG
EST: AATATGAAAGTCGTGCTGCAGTTAACACTGTAGTTCTGCACCCAAATCAG AAAGAGCTAATATCTGGTGATCAGAATGGAAACATACGTGTATGGGATTTG
genomic: AATATGAAAGTCGTGCTGCAGTTAACACTGTAGTTCTGCACCCAAATCAGgttagaatca ... attttttcagAAAGAGCTAATATCTGGTGATCAGAATGGAAACATACGTGTATGGGATTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACTGGCACTTGCCAACGAGAATATGAAAGTCGTGCTGCAGTTAACACTGTAGTTCTGCACCCAAATCAGgttagaatcatttctttcaatatttagttgtatggctttgacttgagtagcacccttttatcctgatttcaaatctccacatgagcgaatttcagattgg
- - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - CTGCAG