1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CTGGAGATGATGGTTCTGTGCATCTTTGGGATACAACTGCAAAGTCTCCTAAGgtatcagaattcggggttctgctgatgttatacttattctttggttgttcaagtgttataaagttaaccgctaaaataaaaataagatgcagccttcaag...
species | Zea mays |
transcript | GRMZM2G088261_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GAGATGATGGTTCTGTGCATCTTTGGGATACAACTGCAAAGTCTCCTAAG GTTTCATGGCTGAAGCAACATTCTGCACCCACAAGTGGTGTTTGTATTTCAEST: gi|71443926|gb|DR824976.1|DR824976
genomic: GAGATGATGGTTCTGTGCATCTTTGGGATACAACTGCAAAGTCTCCTAAGgtatcagaat ... tgttgtgcagGTTTCATGGCTGAAGCAACATTCTGCACCCACAAGTGGTGTTTGTATTTCA
EST: CAACTGCAAAGTCTCCTAAG GTTTCATGGCTGAAGCAACATTCTGCACCCACAAGTGGTGTTTGTATTTCA
genomic: CAACTGCAAAGTCTCCTAAGgtatcagaat ... tgttgtgcagGTTTCATGGCTGAAGCAACATTCTGCACCCACAAGTGGTGTTTGTATTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGGAGATGATGGTTCTGTGCATCTTTGGGATACAACTGCAAAGTCTCCTAAGgtatcagaattcggggttctgctgatgttatacttattctttggttgttcaagtgttataaagttaaccgctaaaataaaaataagatgcagccttcaag
- GAGATG
- - - - - - - - - - - - - - - - - - - GCAAAG