1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TTGGAAAGACATTGGTGTTGGTCAGCTCTCTATCAGAAGTAAAGAAGGCACAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGATgtatgttttctctcttgattgttcatagtattgaagttcactgcagtcatgtgtactagtgtcaatatttattcttccactgcatgccaacttgaaatta...
species | Zea mays |
transcript | GRMZM2G086484_T03 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CAGAGAAAGCATCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGAT --G-TTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATGEST: gi|71311912|gb|DR792439.1|DR792439
genomic: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGATgtatgttttc ... aaactggtagCAGGTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATG
EST: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGAT --G-TTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATGEST: gi|22491304|gb|BU051227.1|BU051227
genomic: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGATgtatgttttc ... aaactggtagCAGGTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATG
EST: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGAT ---GTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATGEST: gi|71762836|gb|DR960773.1|DR960773
genomic: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGATgtatgttttc ... aaactggtagCAGGTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATG
EST: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGAT ---GTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATGEST: gi|33091533|gb|CF051527.1|CF051527
genomic: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGATgtatgttttc ... aaactggtagCAGGTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATG
EST: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGAT --G-TTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATGEST: gi|83278326|gb|DV942334.1|DV942334
genomic: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGATgtatgttttc ... aaactggtagCAGGTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATG
EST: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGAT ---GTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATGEST: gi|19770206|gb|BQ034927.1|BQ034927
genomic: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGATgtatgttttc ... aaactggtagCAGGTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATG
EST: CAGAGAAAGCATCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGAT --G-TTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATGEST: gi|19351231|gb|BM895763.1|BM895763
genomic: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGATgtatgttttc ... aaactggtagCAGGTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATG
EST: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGAT ---GTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATG
genomic: CAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGATgtatgttttc ... aaactggtagCAGGTTGGTAAAATCCTCCTGAATGCTCTGATCTACAAGGGGATAAAAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGGAAAGACATTGGTGTTGGTCAGCTCTCTATCAGAAGTAAAGAAGGCACAGAGAAAGCTTCCAAAGAATCCACTCCTACCATTGTTATAAGAAACGATgtatgttttctctcttgattgttcatagtattgaagttcactgcagtcatgtgtactagtgtcaatatttattcttccactgcatgccaacttgaaatta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA