1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGTGAGCTGCGGCGGCAGAGGCGGCGGCGACCCCGGCGCATACGCCGCGGTGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATGgtgtggttcctcctcctcctacccctccaaagattagacttttctaggcctatttgagtattggttgtgtgattgtgccttgtgtgcttcgatgtttcag...
species | Zea mays |
transcript | GRMZM2G073427_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATG GTGACATAGATGGGGCAAGCCTAGTTACAAACTCTAATGTCATAGAAGATGEST: gi|211441181|gb|FL267164.1|FL267164
genomic: TGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATGgtgtggttcc ... ctacacacagGTGACATAGATGGGGCAAGCCTAGTTACAAACTCTAATGTCATAGAAGATG
EST: TGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATG GTGACATAGATGGGGCAAGCCTAGTTACAAACTCTAATGTCATAGAAGATGEST: gi|211441179|gb|FL267162.1|FL267162
genomic: TGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATGgtgtggttcc ... ctacacacagGTGACATAGATGGGGCAAGCCTAGTTACAAACTCTAATGTCATAGAAGATG
EST: TGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATG GTGACATTTATGGGGCAAGCCTAGTTACAAACTCTAATGTCATAGAAGATGEST: gi|211441180|gb|FL267163.1|FL267163
genomic: TGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATGgtgtggttcc ... ctacacacagGTGACATAGATGGGGCAAGCCTAGTTACAAACTCTAATGTCATAGAAGATG
EST: TGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATG GTGACATAGATGGGGCAAGCCTAGTTACAAACTCTAATGTCATAGAAGATGEST: gi|211302894|gb|FL267159.1|FL267159
genomic: TGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATGgtgtggttcc ... ctacacacagGTGACATAGATGGGGCAAGCCTAGTTACAAACTCTAATGTCATAGAAGATG
EST: TGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATG GTGACATAGATGGGGCAAGCCTAGTTACAAACTCTAATGTCATAGAAGATG
genomic: TGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATGgtgtggttcc ... ctacacacagGTGACATAGATGGGGCAAGCCTAGTTACAAACTCTAATGTCATAGAAGATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGAGCTGCGGCGGCAGAGGCGGCGGCGACCCCGGCGCATACGCCGCGGTGCTCAAGAGGAAGCTCGACCTGTACTGCGCCGCCGTCGCCAAATCCATGgtgtggttcctcctcctcctacccctccaaagattagacttttctaggcctatttgagtattggttgtgtgattgtgccttgtgtgcttcgatgtttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA