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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGCTGCTCTAGCAGCGGTGCTGTTCTTAGCACAGTCGTATGCTTCCCTCGCCGGCGCCAGCGGCCCCAGGGTCATCATCGTCGGCGCCGGCATGTCCGgtaactaatagatataaccatgcatgcgcgcgcgccagacgacgacgacgacgtgtttcttgcgttgcttccatgcatatatatatgcatgcatgtttccatgaaataacgtttattgcctcgctggcgatccatggatctgctgatgcag

Basic information

species Zea mays
transcript GRMZM2G071343_T02
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211421447|gb|FL301683.1|FL301683
EST:     CGCCGGCGCCAGCGGCCCCAGGGTCATCATCGTCGGCGCCGGCATGTCCG                         GGATCTCGGCGGGGAAGACGCTGTGGGAGGCCGGGGTCCGGGATCTGCTGA
genomic: CGCCGGCGCCAGCGGCCCCAGGGTCATCATCGTCGGCGCCGGCATGTCCGgtaactaata ... gctgatgcagGGATCTCGGCGGGGAAGACGCTGTGGGAGGCCGGGGTCCGGGATCTGCTGA
EST: gi|211424034|gb|FL301686.1|FL301686
EST:     CGCCGGCGCCAGCGGCCCCAGGGTCATCATCGTCGGCGCCGGCATGTCCG                         GGATCTCGGCGGGGAAGACGCTGTGGGAGGCCGGGGTCCGGGATCTGCTGA
genomic: CGCCGGCGCCAGCGGCCCCAGGGTCATCATCGTCGGCGCCGGCATGTCCGgtaactaata ... gctgatgcagGGATCTCGGCGGGGAAGACGCTGTGGGAGGCCGGGGTCCGGGATCTGCTGA