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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACATTGTACCAGACAAGGCTTCGAACACGCTCTCCATCATCGACAGCGGCATCGGCATGACCAAGTCCGACCTTGTCAACAACCTCGGTACCATCGCCAGgtccgggaccaaggagttcatggaagcccttgctgctggcgctgatgtgtctatgattgggcag

Basic information

species Zea mays
transcript GRMZM2G069651_T03
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211408945|gb|FK972015.1|FK972015
EST:     ATCGGCATGACCAAGTCCGACCTTGTCAACAACCTCGGTACCATCGCCAG                         TTCGGTGTCGGTTTCTACTCTGCCTACCTCGTCGCCGAGAG
genomic: ATCGGCATGACCAAGTCCGACCTTGTCAACAACCTCGGTACCATCGCCAGgtccgggacc ... gattgggcagTTCGGTGTCGGTTTCTACTCTGCCTACCTCGTCGCCGAGAG
EST: gi|211406934|gb|FK994254.1|FK994254
EST:     ATCGGCATGACCAAGTCCGACCTTGTCAACAACCTCGGTACCATCGCCAG                         TTCGGTGTCGGTTTCTACTCTGCCTACCTCGTCGCCGAGAGGGTCGTCGTG
genomic: ATCGGCATGACCAAGTCCGACCTTGTCAACAACCTCGGTACCATCGCCAGgtccgggacc ... gattgggcagTTCGGTGTCGGTTTCTACTCTGCCTACCTCGTCGCCGAGAGGGTCGTCGTG