1 5' 3' | 2 5' 3' |
...tagttgtggtttactcgtagtcgctgtgatgcctacagtgctgtgtaaattattagtctaagacaactctaagcaatttaatgtttgtttgttttaacagGTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCATACCAACATGCCGCCACAGCTTTCACCTTGCCTGCTTAGATTTATGGTTG
species | Zea mays |
transcript | GRMZM2G068128_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCA GTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCATEST: gi|71432992|gb|DR814042.1|DR814042
genomic: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCAgtaagtatta ... gttttaacagGTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCAT
EST: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCA GTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCATEST: gi|93012463|gb|EB637983.1|EB637983
genomic: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCAgtaagtatta ... gttttaacagGTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCAT
EST: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCA GTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCATEST: gi|71332494|gb|DR803211.1|DR803211
genomic: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCAgtaagtatta ... gttttaacagGTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCAT
EST: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCA GTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCATEST: gi|71432993|gb|DR814043.1|DR814043
genomic: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCAgtaagtatta ... gttttaacagGTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCAT
EST: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCA GTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCATEST: gi|149074931|gb|EE163387.2|EE163387
genomic: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCAgtaagtatta ... gttttaacagGTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCAT
EST: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCA GTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCATEST: gi|91876769|gb|EB406726.1|EB406726
genomic: CCTACTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCAgtaagtatta ... gttttaacagGTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCAT
EST: CTCTAAAGACGATGTCCA GTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATATTACGAATCAT
genomic: CTCTAAAGACGATGTCCAgtaagtatta ... gttttaacagGTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCAT
taaattattagtctaagacaactctaagcaatttaatgtttgtttgttttaacagGTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATACTACGAATCATACCAACATGCCGCCACAGCTTTCACCTTGCCTGCTTAGATTTATGGTTG
atttaat putative branch site (score: 22)
tttgtttt putative PPT
aatttaatgtttgttt TA-rich tract