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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagctattgataggcagtgaagtttttatgcattcaaactattaatatgtcattttctattcagGTATCTTGGAGATGAGAATGGCCTTCTTTCTGTATTGAAGTATGATGTAGATGATGGGAAGCTTCAAATAATGCCATACAATGTTCATATCCATTCTCTA

Basic information

species Zea mays
transcript GRMZM2G061103_T02
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ataggcagtgaagtttttatgcattcaaactattaatatgtcattttctattcagGTATCTTGGAGATGAGAATGGCCTTCTTTCTGTATTGAAGTATGATGTAGATGATGGGAAGCTTCAAATAATGCCATACAATGTTCATATCCATTCTCTA
                              tattaat  putative branch site (score: 2)
                                           ttttctattc  putative PPT
                              tattaatatgtcattt  TA-rich tract