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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCTCTGCCTCTGCCGCCGCGCCCGTGAAGCACCTCAAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTATCGCCTCGTCAACTTCGAAGgtactactgcgcgtgcagcgcgcgtcgtgcacggcacttgctccgaacgaatacgttcttggccgtgttag

Basic information

species Zea mays
transcript GRMZM2G061103_T01
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G061103_T01 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os03g10320.1 (Oryza sativa), 5'ss of exon 1
GTCTCTGCCTCTGCCGCCGCGCCCGTGAAGCACCTCAAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTATCGCCTCGTCAACTTCGAAGgtactactgcgcgtgcagcgcgcgtcgtgcacggcact-tgctccgaacgaatacgttcttggccgtgttag-----------------------------
    |  || | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    |  |  | | | | || || ||      || || |   |  |     || |   |||| |                                 
TCGGCCACCCCCGCCGCCGCGCCCGTCAAGCACCTCAAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTCAGCTTCGAAGgtacgcacgtactagta-cacacgccgcgccgtctgctctggttgcattgcgcgtgtgccgcgccgcgcgcacgcttgcgcctaaaagttggtcagattca