Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|148941453|gb|EC886375.2|EC886375EST: CCTGCGGTTCGTCGAGGAGTTCGTGCTTCGGAACGTCCTGCCTTTCTACG GGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
genomic: CCTGCGGTTCGTCGAGGAGTTCGTGCTTCGGAACGTCCTGCCTTTCTACGgtgagtacac ... agcgccgcagGGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
EST:
gi|148970693|gb|EE021409.2|EE021409EST: CCTGCGGTTCGTCGAGGAGTTCGTGCTTCGGAACGTCCTGCCTTTCTACG GGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
genomic: CCTGCGGTTCGTCGAGGAGTTCGTGCTTCGGAACGTCCTGCCTTTCTACGgtgagtacac ... agcgccgcagGGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
EST:
gi|101394549|gb|EB819209.1|EB819209EST: CTGCCTTTCTACG GGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
genomic: CTGCCTTTCTACGgtgagtacac ... agcgccgcagGGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
EST:
gi|148935916|gb|EC879967.2|EC879967EST: CCTGCGGTTCGTCGAGGAGTTCGTGCTTCGGAACGTCCTGCCTTTCTACG GGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
genomic: CCTGCGGTTCGTCGAGGAGTTCGTGCTTCGGAACGTCCTGCCTTTCTACGgtgagtacac ... agcgccgcagGGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
EST:
gi|148940917|gb|EC885752.2|EC885752EST: CCTGCGGTTCGTCGAGGAGTTCGTGCTTCGGAACGTCCTGCCTTTCTACG GGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
genomic: CCTGCGGTTCGTCGAGGAGTTCGTGCTTCGGAACGTCCTGCCTTTCTACGgtgagtacac ... agcgccgcagGGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
EST:
gi|31360031|gb|CD444388.1|CD444388EST: CCTGCGGTTCGTCGAGGAGTTCGTGCTTCGGAACGTCCTGCCTTTCTACG GGAACACCCACACGACGGACAGCTACGTAGGCATGCACACGAGCAAGCTGG
genomic: CCTGCGGTTCGTCGAGGAGTTCGTGCTTCGGAACGTCCTGCCTTTCTACGgtgagtacac ... agcgccgcagGGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
gtgagtacacagctcatgttttttttttccttggacaaacgaatacgcctcggtgctcatacgtgcgtgtgggtcggcgattggctctggagcgccgcagGGAACACCCACACGACGGACAGCTACGTGGGCATGCACACGAGCAAGCTGGCCGGGGATGCGGCGCGGTACGTGAAGCGCAGCCTAGGCGCGGGGCCGCG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC