1 5' 3' | 2 5' 3' | 3 5' 3' |
gtacgccgtcgtcgcccgatcccctctcttctccaaattccttcctgctccattccgtgtgtctgatcctacctaacctgtttgtgcgcgtgtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGGTCACTGATGACCGCGAG
species | Zea mays |
transcript | GRMZM2G058407_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186460|gb|FL239191.1|FL239191
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|32863264|gb|CF002946.1|CF002946
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTGTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211188850|gb|FL239192.1|FL239192
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|32936820|gb|CF041639.1|CF041639
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTGTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186450|gb|FL239181.1|FL239181
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|45213689|gb|CK849962.1|CK849962
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186452|gb|FL239183.1|FL239183
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|32937577|gb|CF042396.1|CF042396
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTGTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186458|gb|FL239189.1|FL239189
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186455|gb|FL239186.1|FL239186
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|32864829|gb|CF004511.1|CF004511
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTGTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|116818620|gb|EC861668.1|EC861668
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186449|gb|FL239180.1|FL239180
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|32936664|gb|CF041483.1|CF041483
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTGTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|32906973|gb|CF011786.1|CF011786
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTGTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186448|gb|FL239179.1|FL239179
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186459|gb|FL239190.1|FL239190
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186451|gb|FL239182.1|FL239182
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186454|gb|FL239185.1|FL239185
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|44681672|gb|CK786720.1|CK786720
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|33942654|gb|CF349254.1|CF349254
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186453|gb|FL239184.1|FL239184
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211089528|gb|FL476391.1|FL476391
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186456|gb|FL239187.1|FL239187
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|211186447|gb|FL239178.1|FL239178
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGEST: gi|76292026|gb|DV031594.1|DV031594
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
EST: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACC ACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
genomic: ACGAGTTCGTGGAGCGGTCCGTGCAGCTCTTCCGCGCCGACCCCAACACCgtacgccgtc ... gtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAG
gctccattccgtgtgtctgatcctacctaacctgtttgtgcgcgtgtgtctgcagACCCGCTACGTGATGAAGTATCGGCACTGCGAGGGGAAGCTCGTGCTCAAGGTCACTGATGACCGCGAG
acctaac putative branch site (score: 141)