Sequence
atgc intronic sequence ATGC exonic sequencegtattcattgaatactcaaatttttagtgatctatagtaatttgtcaatgatgtattacaaaaaatagtgttagagcactaatttctttgatcttttgaatttttgaataccccatcttaaatgtctaggcgcttctgagtgccgaccaccatctcccatggcacagGAGCTCCCCATCCTCCTCTTGCCAGGGCGCCGTTGCTGAGCTCGCCCTGCCCCCATTCATGGACGCCGTCGGGTCACCCGTTCCTATCTCCCCTCGCCCT
Basic information
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|32861885|gb|CF001567.1|CF001567EST: CTGCTCCAGAACTCAGTGCCGACAGGGGCGGGCCCAGGGGTGGTTCATGG GAGCTCCCCATCCTCCTCTTGCCAGGGCGCCGTTGCTGAGCTCGCCCTGCC
genomic: CTGCTCCAGAACTCAGTGCCGACAGGGGCGGGCCCAGGGGTGGTTCATGGgtattcattg ... catggcacagGAGCTCCCCATCCTCCTCTTGCCAGGGCGCCGTTGCTGAGCTCGCCCTGCC
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.ccatcttaaatgtctaggcgcttctgagtgccgaccaccatctcccatggcacagGAGCTCCCCATCCTCCTCTTGCCAGGGCGCCGTTGCTGAGCTCGCCCTGCCCCCATTCATGGACGCCGTCGGGTCACCCGTTCCTATCTCCCCTCGCCCT
ccatctccc CT-rich tract
ttaaatgt TA-rich tract
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
gtattcattgaatactcaaatttttagtgatctatagtaatttgtcaatgatgtattacaaaaaatagtgttagagcactaatttctttgatcttttgaatttttgaataccccatcttaaatgtctaggcgcttctgagtgccgaccaccatctcccatggcacagGAGCTCCCCATCCTCCTCTTGCCAGGGCGCCGTTGCTGAGCTCGCCCTGCCCCCATTCATGGACGCCGTCGGGTCACCCGTTCCTATCTCCCCTCGCCCT
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