Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|74245592|gb|DT653506.1|DT653506EST: TCGCGCTGGATGGAGGTCGACGCCACCGCGCTGCCCTCGGGGCGCCTCTC CAGGCTCAAGCTCCGCGGCCTAAGGCAGCTGTCCGACGCCGGTCTAGCCT
genomic: TCGCGCTGGATGGAGGTCGACGCCACCACGC-G-CCAC----CGCCTCTCcctcgacgcc ... ggcgcctctcCAGGCTCAAGCTCCGCGGCCTAAGGCAGCTGTCCGACGCCGGTCTAGCCT
EST:
gi|149108618|gb|EE292871.2|EE292871EST: GCCTGCTCGCGCTGGATGGAGGTCGACGCCACCACGCGCCACCGCCTCTC CAGGCTCAAGCTCCGCGGCCTAAGGCAGCTGTCCGACGCCGGTCTAGCCTC
genomic: GCCTGCTCGCGCTGGATGGAGGTCGACGCCACCACGCGCCACCGCCTCTCcctcgacgcc ... ggcgcctctcCAGGCTCAAGCTCCGCGGCCTAAGGCAGCTGTCCGACGCCGGTCTAGCCTC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CGCTCGTCTTCGCGTCGCTCTCGCCCACCGACCGCAACGCCTGCTCCCTCGCCTGCTCGCGCTGGATGGAGGTCGACGCCACCACGCGCCACCGCCTCTCcctcgacgcccgcgccgcgctgggcaacgctgcccccgcgctgttcgcgcggttcacggccgtcacgaagctggcgctccgctgggcgcgcgggtcgggcgcggacagcctctccgactacggcgctgcggcggtggccaccgcgctgccctcggggcgcctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGCCACCG