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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaactctgtactagatctgttttgacaattggagcaatgattggtgctgtgactagcggcaacctggcagacattcttggacgcaaaatggttaagtaattcagctgcagcagttgataagtaaaatggttaccattattcatcctcacatctcttccatttgcatttatcacagACCATGCGATTTGCAGCAGTTGTATGCATTTTTGGCTGGCTTACTGTATATTTTGCCAAG

Basic information

species Zea mays
transcript GRMZM2G027595_T01
intron # 11
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtaaaatggttaccattattcatcctcacatctcttccatttgcatttatcacagACCATGCGATTTGCAGCAGTTGTATGCATTTTTGGCTGGCTTACTGTATATTTTGCCAAG
                      tcctcac  putative branch site (score: 2)
              attattcat  TA-rich tract