Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagcttcactatcggactgtactcatgtctactatctgatcatgtcaaagttctgacaattcttattattttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC

Basic information

species Zea mays
transcript GRMZM2G007276_T03
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os05g38550.1 (Oryza sativa), 3'ss of exon 2
gtaagcttcactatcggactgtactcatgtctactatctgatcatgtcaaagttctgacaattcttattattttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
||||||||  |||| |             ||||  || |    || ||||  |||| |||    |||| || || |||||| ||||||||| |||||||| || ||||||||||| |||||||||||||| ||||||||||  |||||||||||||| ||||||||||||||||| ||||| ||
gtaagctt-gctattga------------tctatgattttgctatatcaattttctaacagggtttataatgttcaattcttagTTTATCCTGATGGGCGCGTATGCATTTCTATCCTTCATCCACCTGGCGAAGATCCCAACGGTTATGAGCTTGCGAGCGAACGGTGGACACCTGTGCATAC

upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA12G06960.1 (Glycine max), 3'ss of exon 3
gtaagcttcactatcggact-gtactcatgtctactatctgatcatgtcaaagttctgacaattcttattattttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
|| ||  |   | | | | | ||  |  ||  |    |   |  |  | |||||       ||  ||  | ||     ||  |||| ||||| ||||| || |||||||| || ||||||||||| |||||||| ||||| | |||||| |||||||| || || || |||||||| || || ||
gttagtgttttttttgaatttgtgattttgctttgatttgaactacatgaaagt------gatgttttctgttcaatttttgcagTATATCCCGATGGCCGGGTTTGCATATCAATTCTTCATCCTCCTGGTGAGGATCCAAATGGTTACGAGCTTGCGAGTGAGCGCTGGACACCTGTTCATAC

upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA15G04470.2 (Glycine max), 3'ss of exon 3
gtaagcttcactatcggactgtactcatgtctact---atctgatcatgtcaaagttctgacaattcttattatt-ttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
             | ||  ||  ||||| | || |   ||||     ||    |    ||| |||   |  |  | ||  |||  |||| || || |||||||| |||||||| || |||||||||||||| ||||| || || | |||||||||||||||||| || || ||||| || || || ||
------------gttggtttg-gctcatttttatttttatcttgctttgattgatacatgataatgaatgatgctgttccatttgcagTGTACCCCGATGGGCGAGTTTGCATATCAATTCTTCATCCACCCGGTGATGACCCAAATGGTTATGAGCTTGCAAGTGAGCGCTGGACGCCTGTTCATAC

upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA11G14980.1 (Glycine max), 3'ss of exon 3
gtaagcttcactatc---ggactgtactcatgtctactatctgatcatgtcaaagttctga-caattcttattattttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
|| || ||   | |        |||  |  ||  |        |  |  | |||||  | |   ||  ||  | ||     ||  |||| ||||| ||||| || |||||||| || ||||||||||| |||||||| ||||| | |||||||||||||||||| || || |||||||| || || ||
gttagtttttttttttttaatttgtgattttgctttgataggaacaacatgaaagtgatcagtgatgtttcctgttcaatttttgcagTATATCCTGATGGCCGGGTTTGCATATCAATTCTTCATCCTCCTGGTGAGGATCCAAATGGTTATGAGCTTGCAAGTGAGCGCTGGACACCTGTTCATAC

upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA13G40990.1 (Glycine max), 3'ss of exon 3
gtaagcttcactatcggactgtactcatgtctactatctgatcatgtcaaagttctgacaattcttattatt-ttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
             | || ||| || ||| | |  ||||       |   ||    ||| | |   |  | || || ||||  |||| ||||| |||||||| |||||||| || ||||||||||| |||||||| || || | |||||||||||||||||| || || ||||| || || || ||
------------gttggtctg-acacattttttttatcctgcttcgattaatacatgaaattcaatgatgttgttcaatttgcagTGTATCCTGATGGGCGAGTTTGCATATCAATTCTTCATCCTCCTGGTGACGACCCAAATGGTTATGAGCTTGCAAGTGAGCGCTGGACGCCTGTTCATAC

upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: AT3G46460.1 (Arabidopsis thaliana), 3'ss of exon 3
gtaagcttcactatcggactgtactcatgtctactatctgatcatgtcaaagttctgacaattct-------tatt-attttgaattct-cagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
|| || |         |  | | | |   |   ||   ||||| |||   |||    |   || |       | ||  | |||   ||| |||||||||| ||||| || ||||| || |||||||| ||||| |||||||| ||||| ||||| |||||||||||||| || || ||||| || || |||||
gttagttctttctctcggttatgcgctcattagctcattgatcttgtttgagtagctaaggttttgtgaaaatgttcgtcttgtggtctgcagTTTATCCCGATGGCCGCGTTTGTATATCTATTCTACATCCTCCTGGTGATGATCCAAGTGGATATGAGCTTGCAAGTGAGCGTTGGACGCCTGTTCACAC

upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: AT5G59300.1 (Arabidopsis thaliana), 3'ss of exon 3
---------------gtaagcttcactatcggactgtactcatgtctactatctgatcatgtcaaagttctgacaattcttattattttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
                |  | ||    |||||       |       | |||      | | || |  | |||    | |  |||| ||       |||||||| | ||||| ||||||||||| |||||||||||||| || ||||| ||||| || |||||||||||||||||||| || ||||| || || || ||
gttagttttctctctatcggttttg--atcggggaaggattcaaaggaatatgaatagaagacagacgtttgaatggtttacttatatttgtcctgcagTTTATTCTGATGGTCGTGTTTGCATATCTATTCTTCATCCTCCCGGTGATGATCCTAGCGGTTATGAGCTTGCAAGCGAGCGTTGGACTCCTGTTCATAC

upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: AT3G55380.2 (Arabidopsis thaliana), 3'ss of exon 3
gtaagcttcactatcggactgtactcatgtctactatctgatcatg--tcaaagttctgacaattcttattattttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
|| |       |   |||   ||    | | |         | | |  | |   ||||||  |||  || | |||||| | |  ||||||| | |||||    ||||||||||||||||||||||| |||||||| |||||   ||| || ||||||||    ||||| ||||| || || || ||
gtgactgatttttctggaaaatatatctctttctcgagcttttaggatttagtcttctgatgatttatactcttttgactgc--agTTTATTCTGATGGAAAAGTTTGCATTTCTATTCTTCATCCTCCTGGTGATGATCCTCATGGATACGAGCTTGCCTCTGAACGTTGGACCCCTGTCCATAC

upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: Vv08s0007g00120.t01 (Vitis vinifera), 3'ss of exon 3
---------gtaagcttcac-tatcggactgtactcatg--tctactatctgatcatgtcaaagttctgacaattcttattattttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
          || || || | |||     | ||   |||  | |   ||  || ||        | || |   | | || | | || || |  |||||||||| ||||| || |||||||| || ||| | ||||| |||||||| || || | ||| |||||||||||||| || || |||||||| || |||||
gttaacttcttatgcctctcatatacatatatatatatgaatttctcattggagcactctctgatgctaattgtacctact-tcttaaactg-cagTTTATCCTGATGGACGAGTTTGCATATCAATTTTACATCCTCCTGGTGAGGACCCAAATGGCTATGAGCTTGCAAGTGAGCGTTGGACACCTGTCCACAC

upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: Vv06s0004g04430.t01 (Vitis vinifera), 3'ss of exon 3
---gtaagcttcactatcggactgtactcatgtctactatctgatcat---gtcaaagttctga--caattcttattattttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
   |   | ||  | | | |  |||  |    | |    ||| | |||     ||  | |   |  ||| |    |  |     | |  |||||||||| ||||| || || ||||| || ||||| ||||| |||||||| || || | ||| |||||||||||||| || || ||||  ||| | || ||
gttggttgtttgtccaactgcatgtgtttgatttttgactcttaccattggagcatggcttgaaatcaacttggttcttgcatgaattacagTTTATCCAGATGGACGAGTATGCATATCAATTCTCCATCCTCCTGGTGAGGACCCAAATGGATATGAGCTTGCAAGTGAGCGCTGGATGCCAATCCATAC

upper sequence: GRMZM2G007276_T03 (Zea mays), 3'ss of exon 3
lower sequence: PP1S75_236V6.1 (Physcomitrella patens), 3'ss of exon 5
--------gtaagcttcactatcggactgtactcatgtctactatctgatcatgtcaaagttctgacaattcttatt----------attttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
            | || ||| |  || || ||||||||    ||  |  || |  | | ||||||   |||   ||           | |||  ||   |||||||||| ||||| || ||||||||||| ||||| ||| | |||||||| ||||| | |||||||||  | || || || || ||| | || ||||| ||
gaaagaactctggtttgactct--gaatgcactcatgtgacttaatttttctttacgatgttctgcttatttccataccaatccttgacttttcatgtgcagTTTATCCTGATGGACGGGTTTGCATTTCAATTCTACATGCTCCTGGTGATGATCCAAATGGTTATGAATTGGCGAGTGAGCGTTGGTCTCCCGTGCATAC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211071777|gb|FK958783.1|FK958783
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211516545|gb|FK958732.1|FK958732
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211518901|gb|FK958739.1|FK958739
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211516539|gb|FK958726.1|FK958726
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211066305|gb|FK958763.1|FK958763
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211509459|gb|FK958684.1|FK958684
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCA
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCA
EST: gi|211066307|gb|FK958765.1|FK958765
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211071784|gb|FK958790.1|FK958790
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCMTCCGAATG                         TTTATCCGGATGGGCGT
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGT
EST: gi|211518902|gb|FK958740.1|FK958740
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|6626280|gb|AW257812.1|AW257812
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGNGGCATTCGAATG                         GTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTG
EST: gi|211071786|gb|FK958792.1|FK958792
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAA
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCC-GGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAA
EST: gi|211518903|gb|FK958741.1|FK958741
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|38688158|gb|CK145189.1|CK145189
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TT-ATCCGGATGGGCGTGTTTGCATTTCTATTCTTCAT
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCAT
EST: gi|211511833|gb|FK958703.1|FK958703
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211509460|gb|FK958685.1|FK958685
EST:     CAACAGCCCGCCATCAGTAAGWTTTACTTCTGGGATGTGGCATCCGAWTG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211516540|gb|FK958727.1|FK958727
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGT
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGT
EST: gi|211069048|gb|FK958776.1|FK958776
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211066297|gb|FK958755.1|FK958755
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGGATGGGCGTGTTTGCATTTCTATTCTTCATCCAC
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGG-ATGGGCGTGTTTGCATTTCTATTCTTCATCCAC
EST: gi|211509456|gb|FK958681.1|FK958681
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211071779|gb|FK958785.1|FK958785
EST:     CAACAGCCCGCCATCAGTAAGATT-ACTTYTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGT
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGT
EST: gi|211069040|gb|FK958768.1|FK958768
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211069039|gb|FK958767.1|FK958767
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211509462|gb|FK958687.1|FK958687
EST:     CAACAGCCCGCCATCAGTMAGATTTACTTCTGGGATGTGGCATCCGAATG                         TWTATCCGGATGGGCGTGTTTGCATKTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211514181|gb|FK958710.1|FK958710
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCACTCCACCTGGTGAA
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCA-TCCACCTGGTGAA
EST: gi|211509463|gb|FK958688.1|FK958688
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTC
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTC
EST: gi|211066298|gb|FK958756.1|FK958756
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATC
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATC
EST: gi|211511831|gb|FK958701.1|FK958701
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211511822|gb|FK958692.1|FK958692
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211069052|gb|FK958780.1|FK958780
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211509458|gb|FK958683.1|FK958683
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGMATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211516544|gb|FK958731.1|FK958731
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211071778|gb|FK958784.1|FK958784
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211511834|gb|FK958704.1|FK958704
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211518906|gb|FK958744.1|FK958744
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211514185|gb|FK958714.1|FK958714
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATAGGCGTGTTTGCA
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCA
EST: gi|211516546|gb|FK958733.1|FK958733
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211516547|gb|FK958734.1|FK958734
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTTATCCGGATGG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTT-ATCCGGATGG
EST: gi|211514190|gb|FK958719.1|FK958719
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211069053|gb|FK958781.1|FK958781
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTNCTATTCTTCATCCACCTGGT
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTT-CTATTCTTCATCCACCTGGT
EST: gi|211069051|gb|FK958779.1|FK958779
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTRTCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211069050|gb|FK958778.1|FK958778
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211071787|gb|FK958793.1|FK958793
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211518907|gb|FK958745.1|FK958745
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211066304|gb|FK958762.1|FK958762
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211514192|gb|FK958721.1|FK958721
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTA
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTA
EST: gi|211518911|gb|FK958749.1|FK958749
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211066299|gb|FK958757.1|FK958757
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|9794336|gb|BE552644.1|BE552644
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211518905|gb|FK958743.1|FK958743
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCT
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCT
EST: gi|37416406|gb|CF645853.1|CF645853
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTA
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTA
EST: gi|211516538|gb|FK958725.1|FK958725
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211066295|gb|FK958753.1|FK958753
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211514184|gb|FK958713.1|FK958713
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211514186|gb|FK958715.1|FK958715
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATT-CTATTCTTCATMCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|14206780|gb|BG840458.1|BG840458
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTCTGCATTCCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211069046|gb|FK958774.1|FK958774
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211509464|gb|FK958689.1|FK958689
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211516536|gb|FK958723.1|FK958723
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211071788|gb|FK958794.1|FK958794
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211069043|gb|FK958771.1|FK958771
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCAYCCGAATG                         TTTATCCCGGATGGGGCGTGTTTGCATTTCTATTCTTCATCCACC
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCC-GGATGGG-CGTGTTTGCATTTCTATTCTTCATCCACC
EST: gi|211514189|gb|FK958718.1|FK958718
EST:     AACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCA
genomic: AACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCG-AATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCA
EST: gi|211518910|gb|FK958748.1|FK958748
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCAT
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCAT
EST: gi|166597045|gb|EG301235.1|EG301235
EST:     CATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211071783|gb|FK958789.1|FK958789
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211511836|gb|FK958706.1|FK958706
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211518908|gb|FK958746.1|FK958746
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|38688161|gb|CK145192.1|CK145192
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211066296|gb|FK958754.1|FK958754
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211511826|gb|FK958696.1|FK958696
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211518909|gb|FK958747.1|FK958747
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211514188|gb|FK958717.1|FK958717
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211069045|gb|FK958773.1|FK958773
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211509457|gb|FK958682.1|FK958682
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTT
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTT
EST: gi|211511827|gb|FK958697.1|FK958697
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAA
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGG-ATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAA
EST: gi|211069044|gb|FK958772.1|FK958772
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211069049|gb|FK958777.1|FK958777
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG
EST: gi|211071782|gb|FK958788.1|FK958788
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTTGCATTTTTATTCTTCATCCACCTGGTGAA
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTT-GCATTTCTATTCTTCATCCACCTGGTGAA
EST: gi|60347046|gb|DN214019.1|DN214019
EST:     CAACAGCCCGCCATCAGTAAGATTTACTTATGGGATGTGGCATCCGAATG                         TTTATCCGGATGGGCGTGTTTGCATTTATATTCTTCATCCACCTGGTGAAG
genomic: CAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 899

TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 695

TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 885

TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 891

TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGGGATGTGGCATCCGAATGgtaagcttca ... gaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctactatctgatcatgtcaaagttctgacaattcttattattttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC
                       ttctgac  putative branch site (score: 891)
                                                ttctc  putative PPT
                            acaattcttattattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaagcttcactatcggactgtactcatgtctactatctgatcatgtcaaagttctgacaattcttattattttgaattctcagTTTATCCGGATGGGCGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAGTGGTTATGAGCTTGCAAGCGAACGGTGGACACCAGTGCACAC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGTGGA