Sequence
atgc intronic sequence ATGC exonic sequence...taataaagaaaaatcctccaatgacactgaaagttccgccctataaatactatggagcttgccaagctatttcgctcgtacttgccaattcatcattcagGGTGCTCTTTCATTGTCCTAAGGAAGTAGCTACTCAAGTCTCAGCATGTCCTCTCGTCCAAATTCCTAAACCCGAAAATCGCCCTAGGGCAAAGTTTCAC
Basic information
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.aatactatggagcttgccaagctatttcgctcgtacttgccaattcatcattcagGGTGCTCTTTCATTGTCCTAAGGAAGTAGCTACTCAAGTCTCAGCATGTCCTCTCGTCCAAATTCCTAAACCCGAAAATCGCCCTAGGGCAAAGTTTCAC
aattcat TA-rich tract
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
taataaagaaaaatcctccaatgacactgaaagttccgccctataaatactatggagcttgccaagctatttcgctcgtacttgccaattcatcattcagGGTGCTCTTTCATTGTCCTAAGGAAGTAGCTACTCAAGTCTCAGCATGTCCTCTCGTCCAAATTCCTAAACCCGAAAATCGCCCTAGGGCAAAGTTTCAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - -aagaaaa
- - - - - - -tcctcca
- - - - - - - - - - - - cactgaa
- - - - - - - - - - - - - - - - - tccgccc
- - - - - - - - - - - - - - - - - - - - - ataaata
- - - - - - - - - - - - - - - - - - - - - - - - -ctatgga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -cttgcca