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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGATTTTGATTTGAGATTGATGTATGGGATTTATAAAGCTACAGGACCCGGGGGTTATAATATTGAGCCCAAAGCTTTCAAATCTTCGTTCCCGTCTCAGgttagtgttcatactttagaattttatttaatatattttggcttgataactcgattcatgtgcttgtttattaagtatattagatcgattgcaaattagt...

Basic information

species Vitis vinifera
transcript Vv06s0004g04870.t01
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|56408096|gb|CX016348.1|CX016348
EST:     GGGGTTATAATATTGAGCCCAAAGCTTTCAAATCTTCGTTCCCGTCTCAG                         GTCCGGTTCTCTGTTTTGGAAGATTGCTTGCCGTTGGCTGAAGAAAAGTTC
genomic: GGGGTTATAATATTGAGCCCAAAGCTTTCAAATCTTCGTTCCCGTCTCAGgttagtgttc ... ttttttgtagGTCCGGTTCTCTGTTTTGGAAGATTGCTTGCCGTTGGCTGAAGAAAAGTTC