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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTACATCGACAGTGTGTGGCCCAATCCTCACAAGCTCCTCCCGGAAGATCCATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAGgtaaagttgtcgcttcttccaggttacttgtttctcactaccaacag

Basic information

species Selaginella moellendorffii
transcript EFJ32471
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169072186|gb|FE479942.1|FE479942
EST:     CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAG                         GTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
genomic: CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAGgtaaagttgt ... ctaccaacagGTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
EST: gi|169072187|gb|FE479943.1|FE479943
EST:     CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAG                         GTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
genomic: CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAGgtaaagttgt ... ctaccaacagGTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
EST: gi|169116504|gb|FE517529.1|FE517529
EST:     CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAG                         GTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
genomic: CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAGgtaaagttgt ... ctaccaacagGTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
EST: gi|169116505|gb|FE517530.1|FE517530
EST:     CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAG                         GTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
genomic: CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAGgtaaagttgt ... ctaccaacagGTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
EST: gi|169101673|gb|FE500697.1|FE500697
EST:     CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAG                         GTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
genomic: CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAGgtaaagttgt ... ctaccaacagGTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
EST: gi|169101672|gb|FE500696.1|FE500696
EST:     CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAG                         GTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC
genomic: CATACAAAAAGGCTGTGGCTCGCTTCTGGGCAGACTTTGGTGACAAAAAGgtaaagttgt ... ctaccaacagGTCTATGACGCCGGTAGCCGACTCATACGAGCTACCACCGAGGAGGAGCGC