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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagcgaggaagcatcgaagtcccatattgttgggacttccccaggtcctgtcttggtttatgacttggccgctataggagcttaggcctgatggaagccgcgaagatcgtttgctagcgacaattatcgttccggacattcgtttggcctttctaattcacttgttcagCCGGTGTATCACACAACAAA

Basic information

species Selaginella moellendorffii
transcript EFJ30183
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tagcgacaattatcgttccggacattcgtttggcctttctaattcacttgttcagCCGGTGTATCACACAACAAA
                                    ttctaat  putative branch site (score: 2)
                                          ttcactt  CT-rich tract
                                   tttctaatt  TA-rich tract