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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttcgtacgtttggtcctttgttctctcgagctccaaacgttttcctcttttctaacgttttattttttttagctctttcagGGGTCGTTTGCCAACTTCTGAGGCTCAAGAAGTATGCCAGAGATCTGCGGCGGCCTGGGAGTTTGCAAACAAAATCGGTCTTTCAAGACAGGTGAACAAT

Basic information

species Selaginella moellendorffii
transcript EFJ23956
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cgagctccaaacgttttcctcttttctaacgttttattttttttagctctttcagGGGTCGTTTGCCAACTTCTGAGGCTCAAGAAGTATGCCAGAGATCTGCGGCGGCCTGGGAGTTTGCAAACAAAATCGGTCTTTCAAGACAGGTGAACAAT
                       ttctaac  putative branch site (score: 1)
                               ttttattttttttagc  CT-rich tract
                     ttttctaacgttttat  TA-rich tract