1 5' 3' | 2 5' 3' | 3 5' 3' |
AGCTCGCGGACCAGCTCCAGCTCGGGCAGAAGTTCTACGTTGTTGGGCTTTCCATGGGAGGATATCCGTGCTGGGCTTGTCTCAAGCATATACCACACAGgtaagtagttctatcgcatcgatagagatcgatctaagttcttccttgtttggttttctag
species | Selaginella moellendorffii |
transcript | EFJ23250 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TCCATGGGAGGATATCCGTGCTGGGCTTGTCTCAAGCATATACCACACAG GCTGGCTGGAGTTGCTATGATGGCTCCAGTGGTGAATTACTGGTGGCCTGGEST: gi|169046101|gb|FE455558.1|FE455558
genomic: TCCATGGGAGGATATCCGTGCTGGGCTTGTCTCAAGCATATACCACACAGgtaagtagtt ... ggttttctagGCTGGCTGGAGTTGCTATGATGGCTCCAGTGGTGAATTACTGGTGGCCTGG
EST: TCCATGGGAGGATATCCGTGCTGGGCTTGTCTCAAGCATATACCACACAG GCTGGCTGGAGTTGCTATGATGGCTCCAGTGGTGAATTACTGGTGGCCTGG
genomic: TCCATGGGAGGATATCCGTGCTGGGCTTGTCTCAAGCATATACCACACAGgtaagtagtt ... ggttttctagGCTGGCTGGAGTTGCTATGATGGCTCCAGTGGTGAATTACTGGTGGCCTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCTCGCGGACCAGCTCCAGCTCGGGCAGAAGTTCTACGTTGTTGGGCTTTCCATGGGAGGATATCCGTGCTGGGCTTGTCTCAAGCATATACCACACAGgtaagtagttctatcgcatcgatagagatcgatctaagttcttccttgtttggttttctag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT