1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...catcgtggatgagcttgaagagctgttcgagcatggaattcagggggtggatgtcatttcacttagcaattttgtttaagtgtttgtatcttctctatagGTGTATGGTAGAAACTGGATCATCGATATATGCCTTCAACAAAG
species | Selaginella moellendorffii |
transcript | EFJ22443 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
ggtggatgtcatttcacttagcaattttgtttaagtgtttgtatcttctctatagGTGTATGGTAGAAACTGGATCATCGATATATGCCTTCAACAAAG
tttgtatcttctct CT-rich tract
aattttgtttaagt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| catcgtggatgagcttgaagagctgttcgagcatggaattcagggggtggatgtcatttcacttagcaattttgtttaagtgtttgtatcttctctatagGTGTATGGTAGAAACTGGATCATCGATATATGCCTTCAACAAAG
- - - - - gagcttg
- - - - - - - - - - -gctgttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttttgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tttgtat