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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagagatggcaagaaatgatgcttgctagagagtaggacatcctacagcattttgaagcacatacccatatcgtgcagctctggttgttgagttttggagcccctgacccagtcatcagccctctccagctaagttaacaaacaagttaacatctgaccctattctcaagatattcatttcctctcttttctagGGCTTTCGATGGCAGGCGACTACTGCGCGATTGGATCGATGCATGGCATTCATGGGGTTGAAATGCTTGAGGTGCATTTTGACTACAAGGTGCTGGTGCA

Basic information

species Selaginella moellendorffii
transcript EFJ22442
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaacaagttaacatctgaccctattctcaagatattcatttcctctcttttctagGGCTTTCGATGGCAGGCGACTACTGCGCGATTGGATCGATGCATGGCATTCATGGGGTTGAAATGCTTGAGGTGCATTTTGACTACAAGGTGCTGGTGCA
            atctgac  putative branch site (score: 3)
                                tattcatttcctctct  putative PPT
                               atattcattt  TA-rich tract