1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaagttgcagagagatttttttttgcgattcttaccagtatttttcagTTGAAAGAGCTAGAAAGGGGGGTGGATATCCTGGTGGCAACTCCAGGTCGCCTGGACGACCTTATGCAACGGGGCAGGATTTCTCTGTCCTTGGTCCGGT
species | Selaginella moellendorffii |
transcript | EFJ22144 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CAGGAGTGAAAGTGGTTGTCATTTACGGGGGTACTTCGGTCCAGTCACAG TTGAAAGAGCTAGAAAGGGGGGTGGATATCCTGGTGGCAACTCCAGGTCGCEST: gi|169083055|gb|FE496351.1|FE496351
genomic: CAGGAGTGAAAGTGGTTGTCATTTACGGGGGTACTTCGGTCCAGTCACAGgtaagttgca ... tatttttcagTTGAAAGAGCTAGAAAGGGGGGTGGATATCCTGGTGGCAACTCCAGGTCGC
EST: CAGGAGTGAAAGTGGTTGTCATTTACGGGGGTACTTCGGTCCAGTCACAG TTGAAAGAGCTAGAAAGGGGGGTGGATATCCTGGTGGCAACTCCAGGTCGCEST: gi|169030735|gb|FE440850.1|FE440850
genomic: CAGGAGTGAAAGTGGTTGTCATTTACGGGGGTACTTCGGTCCAGTCACAGgtaagttgca ... tatttttcagTTGAAAGAGCTAGAAAGGGGGGTGGATATCCTGGTGGCAACTCCAGGTCGC
EST: CAGGAGTGAAAGTGGTTGTCATTTACGGGGGTACTTCGGTCCAGTCACAG TTGAAAGAGCTAGAAAGGGGGGTGGATATCCTGGTGGCAACTCCAGGTCGC
genomic: CAGGAGTGAAAGTGGTTGTCATTTACGGGGGTACTTCGGTCCAGTCACAGgtaagttgca ... tatttttcagTTGAAAGAGCTAGAAAGGGGGGTGGATATCCTGGTGGCAACTCCAGGTCGC
gtaagttgcagagagatttttttttgcgattcttaccagtatttttcagTTGAAAGAGCTAGAAAGGGGGGTGGATATCCTGGTGGCAACTCCAGGTCGCCTGGACGACCTTATGCAACGGGGCAGGATTTCTCTGTCCTTGGTCCGGT
ttcttac putative branch site (score: 7)
tatttttc putative PPT
agagattttttttt TA-rich tract