Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaaacggagcaatttttcttttgcaagcacgttttgatcacgagtggaacttccagGTGCGCACAGGGTCGCAGTACTATTTCTACATGGAACCACAGACTGCGTTGGTCGTTCCGGACGAGGACAACTGTCTCGTCGTCTACAGTTCCTACCAGA

Basic information

species Selaginella moellendorffii
transcript EFJ19454
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaacggagcaatttttcttttgcaagcacgttttgatcacgagtggaacttccagGTGCGCACAGGGTCGCAGTACTATTTCTACATGGAACCACAGACTGCGTTGGTCGTTCCGGACGAGGACAACTGTCTCGTCGTCTACAGTTCCTACCAGA
                              ttttgat  putative branch site (score: 4)
                                                cttcc  putative PPT
         aatttttctttt  TA-rich tract