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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCAGTGGAGGAAGTACGGACAAAAGATGGCGAAGGGAAACCCATGCCCCCGAGCGTACTATCGCTGCACGGTAGCACCGGGTTGTCCAGTTCGAAAGCAGgtattaaacaggctatgtcggagaaactcggatcaatccaggagtttcttgtgatcaagttgtatgtttcctcaaattcttactttgagaaatttcttttggatgatccag

Basic information

species Selaginella moellendorffii
transcript EFJ17667
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ17667 (Selaginella moellendorffii), 5'ss of exon 1
lower sequence: PP1S47_251V6.1 (Physcomitrella patens), 5'ss of exon 4
CCAGTGGAGGAAGTACGGACAAAAGATGGCGAAGGGAAACCCATGCCCCCGAGCGTACTATCGCTGCACGGTAGCACCGGGTTGTCCAGTTCGAAAGCAGgtattaaacaggctatgtcggagaaactcggatcaatccagg---agtttcttgtgat-caagttgtatgtttc--ctcaaattcttactttgagaaatttcttttgg--atgatccag--
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CCAGTGGAGGAAATATGGTCAGAAGATGGCGAAAGGGAACCCCTGTCCTCGTGCATACTACCGATGCACCGTTGCGCCGGGCTGTCCAGTTCGTAAGCAAgtaatgtctcatcttc--cagcttgttatggattaatttgatgtcaatctactttgacatttttcataaattttgattatgatttttcgtgtgacttacggccttccgtcatgatccgcag