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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttgtctctttgccttatttgttttcggttacttatggaactttgatcttcatgcagGGGTTCTCAAGTTCCTCTCCAGCTTCCTTTGGAAAAATGTCCCACAG

Basic information

species Selaginella moellendorffii
transcript EFJ17456
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtctctttgccttatttgttttcggttacttatggaactttgatcttcatgcagGGGTTCTCAAGTTCCTCTCCAGCTTCCTTTGGAAAAATGTCCCACAG
                                      ctttgat  putative branch site (score: 5)
                                            tcttcat  CT-rich tract
            ttatttgtttt  TA-rich tract