1 5' 3' | 2 5' 3' |
gtaagtcagcttccctgttcttccatttctttgtctcgtgaaaatttccctgttcttccagttcttcgtttctaaaccccgtgactgctaactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTCCTGGGATTCCTATCCGAAGGTGTCGACCTCCCTACTGACTACTTCGAG
species | Selaginella moellendorffii |
transcript | EFJ14904 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169107594|gb|FE514255.1|FE514255
genomic: AGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAA AGAAGCCATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169109865|gb|FE513912.1|FE513912
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169054488|gb|FE460297.1|FE460297
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCGCACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169033665|gb|FE441905.1|FE441905
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169049328|gb|FE458239.1|FE458239
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCGCACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169043485|gb|FE452618.1|FE452618
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|70669637|gb|DN838214.1|DN838214
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169071210|gb|FE477861.1|FE477861
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169057370|gb|FE464751.1|FE464751
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCGCACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169051959|gb|FE460298.1|FE460298
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCGCACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169052796|gb|FE461187.1|FE461187
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCGCACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169107035|gb|FE505980.1|FE505980
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCGCACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTEST: gi|169107036|gb|FE505981.1|FE505981
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
EST: TCTCCAAAGAGAAACTTGGATAACTGGCCCGCACAGCCACCGGAATACAA AGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
genomic: TCTCCAAAGAGAAACTTGGATAACTGGCCCACACAGCCACCGGAATACAAgtaagtcagc ... aactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGT
tttccctgttcttccagttcttcgtttctaaaccccgtgactgctaactttccagAGAAGCGATGTCCGGTCTCGCTGATGACTTCCTGATGCTCGCAAAGAAAGTCCTGGGATTCCTATCCGAAGGTGTCGACCTCCCTACTGACTACTTCGAG
tgctaac putative branch site (score: 17)
ctttcc CT-rich tract
tttctaaa TA-rich tract