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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacatagacttttgtttcttcgtttcgcttcgagtgtcataccacattctcttaactaaactcgccatgcctgttcctatagGTGACGCAAAAGCTGACGGACGGCTCAGCAAGATCGAAGCTCACGTCTCTGGTCAGCAGCCGCAACCATCTCTCCGCCCCCCAATCACAACGCACGTCTT

Basic information

species Selaginella moellendorffii
transcript EFJ14861
intron # 6
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cttcgagtgtcataccacattctcttaactaaactcgccatgcctgttcctatagGTGACGCAAAAGCTGACGGACGGCTCAGCAAGATCGAAGCTCACGTCTCTGGTCAGCAGCCGCAACCATCTCTCCGCCCCCCAATCACAACGCACGTCTT
                          aactaaa  putative branch site (score: 2)
                                          cctgttcct  putative PPT
                        ttaactaaa  TA-rich tract