1 5' 3' | 2 5' 3' | 3 5' 3' |
GTGGATTGAGAGCGATTGCCATCTCTCACCCGCATTACTACAGCACAAACTCTCGATGGAGCGAGGCTTTTGGAGGCGTCCCGGTTTATATCCACGAATGgtattgtctacctttgtttctctctttcatttcgatttctctgtatcgatactatggcag
species | Selaginella moellendorffii |
transcript | EFJ13157 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TCTCGATGGAGCGAGGCTTTTGGAGGCGTCCCGGTTTATATCCACGAATG GGATAAGAAATGGGTGGTTTACCAGCACGAAAACGTAAAGTTCTGGGAGGGEST: gi|169066061|gb|FE473845.1|FE473845
genomic: TCTCGATGGAGCGAGGCTTTTGGAGGCGTCCCGGTTTATATCCACGAATGgtattgtcta ... actatggcagGGATAAGAAATGGGTGGTTTACCAGCACGAAAACGTAAAGTTCTGGGAGGG
EST: TCTCGATGGAGCGAGGCTTTTGGAGGCGTCCCGGTTTATATCCACGAATG GGATAAGAAATGGGTGGTTTACCAGCACGAAAACGTAAAGTTCTGGGAGGG
genomic: TCTCGATGGAGCGAGGCTTTTGGAGGCGTCCCGGTTTATATCCACGAATGgtattgtcta ... actatggcagGGATAAGAAATGGGTGGTTTACCAGCACGAAAACGTAAAGTTCTGGGAGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGATTGAGAGCGATTGCCATCTCTCACCCGCATTACTACAGCACAAACTCTCGATGGAGCGAGGCTTTTGGAGGCGTCCCGGTTTATATCCACGAATGgtattgtctacctttgtttctctctttcatttcgatttctctgtatcgatactatggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG