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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtggagtcaagcttgtggtagcagatcgtcctcagcaatccaaaccattagttttgttttccttgtcactttgattcacagCAAGCCATGTTGTCCCAAATCTTTGTTAA

Basic information

species Selaginella moellendorffii
transcript EFJ13088
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cgtcctcagcaatccaaaccattagttttgttttccttgtcactttgattcacagCAAGCCATGTTGTCCCAAATCTTTGTTAA
                                          ctttgat  putative branch site (score: 5)
                         ttttgttttccttgtc  CT-rich tract
                    attagttttgtttt  TA-rich tract