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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgtggaagtattggacagatggtgctggaaatctgatcgtgtgttcatggcggctgacccgacgtccgaaaacgcaatcccagctaataccgagtatcaggctttggagtgttcagtactggtttaatcctcggttttcttgtagaggacgtgatcatccctggaagCCGAGGCACGTACAAATTACGATGGTGTTGCTGTCTGGTGGGGACTGACTCATAACACAGAGAGCGCTGCCGATTGCTGTCAAGCGTGCTTCAACCAGGC

Basic information

species Selaginella moellendorffii
transcript EFJ12981
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcagtactggtttaatcctcggttttcttgtagaggacgtgatcatccctggaagCCGAGGCACGTACAAATTACGATGGTGTTGCTGTCTGGTGGGGACTGACTCATAACACAGAGAGCGCTGCCGATTGCTGTCAAGCGTGCTTCAACCAGGC
         gtttaat  putative branch site (score: 4)
                                          tcatccct  putative PPT
          tttaat  TA-rich tract