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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtatttctttgtcgtgtgttcacttattgatttctttccgtacttgattgcagtagagatctctcgtataaccagctgggggagattcctttgaacatcggctttcttcaaactagctttgttgatctcttgacttagaaactcatggagcagtattgctttgtctcttccagGGAACAAACTTGTTGACAACATTCCAGACGTGATCGGCCTTATGCAGGCTCTGGCAGTTTT

Basic information

species Selaginella moellendorffii
transcript EFJ12953
intron # 8
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgttgatctcttgacttagaaactcatggagcagtattgctttgtctcttccagGGAACAAACTTGTTGACAACATTCCAGACGTGATCGGCCTTATGCAGGCTCTGGCAGTTTT
         tcttgac  putative branch site (score: 3)
                                     ttgctttgtctcttcc  putative PPT
                ttagaaa  TA-rich tract