1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagctttgcctggtgtgatttcttcttctctccactcaaaatgttcatccttgctggagcagAACCAACACGGAGCTACTCCTTAATCCC
species | Selaginella moellendorffii |
transcript | EFJ12297 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTCCCATGTCAAGATGTGGAGCGACATAACAAGCCCGAAGTTGAGTTCAA AACCAACACGGAGCTACTCCTTAATCCCEST: gi|169109422|gb|FE514107.1|FE514107
genomic: TTCCCATGTCAAGATGTGGAGCGACATAACAAGCCCGAAGTTGAGTTCAAgtaagctttg ... gctggagcagAACCAACACGGAGCTACTCCTTAATCCC
EST: TTCCCATGTCAAGATGTGGAGCGACATAACAAGCCCGAAGTTGAGTTCAA AACCAACACGGAGCTACTCCTTAATCCC
genomic: TTCCCATGTCAAGATGTGGAGCGACATAACAAGCCCGAAGTTGAGTTCAAgtaagctttg ... gctggagcagAACCAACACGGAGCTACTCCTTAATCCC
gcctggtgtgatttcttcttctctccactcaaaatgttcatccttgctggagcagAACCAACACGGAGCTACTCCTTAATCCC
tccttgct CT-rich tract
aaaatgtt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagctttgcctggtgtgatttcttcttctctccactcaaaatgttcatccttgctggagcagAACCAACACGGAGCTACTCCTTAATCCC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT