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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGGAGCCAAGACCGGAAACACGTCAAAGGCTCGGTTTACACAGCAAATGACGACCTCCCTCTCGAGATTCCAATCGGCTTCCACAACGAAATTACTTATgtaagcttggacagtagagaaatttgtcagtcgtgaagctttccttgcag

Basic information

species Selaginella moellendorffii
transcript EFJ12233
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169072000|gb|FE477689.1|FE477689
EST:     ACGACCTCCCTCTCGAGATTCCAATCGGCTTCCACAACGAAATTACTTAT                         ATGCCCGTCATTCCCGACGTGCTTGTTTTCTACTGCGAGGTTGCACCGCCC
genomic: ACGACCTCCCTCTCGAGATTCCAATCGGCTTCCACAACGAAATTACTTATgtaagcttgg ... ttccttgcagATGCCCGTCATTCCCGACGTGCTTGTTTTCTACTGCGAGGTTGCACCGCCC
EST: gi|169072001|gb|FE477690.1|FE477690
EST:     ACGACCTCCCTCTCGAGATTCCAATCGGCTTCCACAACGAAATTACTTAT                         ATGCCCGTCATTCCCGACGTGCTTGTTTTCTACTGCGAGGTTGCACCGCCC
genomic: ACGACCTCCCTCTCGAGATTCCAATCGGCTTCCACAACGAAATTACTTATgtaagcttgg ... ttccttgcagATGCCCGTCATTCCCGACGTGCTTGTTTTCTACTGCGAGGTTGCACCGCCC
EST: gi|169109530|gb|FE514137.1|FE514137
EST:     ACGACCTCCCTCTCGAGATTCCAATCGGCTTCCACAACGAAATTACTTAT                         ATGCCCGTCATTCCCGACGTGCTTGTTTTCTACTGCGAGGTTGCACCGCCC
genomic: ACGACCTCCCTCTCGAGATTCCAATCGGCTTCCACAACGAAATTACTTATgtaagcttgg ... ttccttgcagATGCCCGTCATTCCCGACGTGCTTGTTTTCTACTGCGAGGTTGCACCGCCC