1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GGTCATATTCGAAGCTGTGAAGATGGATAGCATGCAAAAGCTGTGTACCTCTCTGGAACCTTTCCTCCGCAAAGTTgtgagtttctttcttttttctgtttcgatgccttgacatcaaagtttttttttcctttcttctgtgagatcag
species | Selaginella moellendorffii |
transcript | EFJ11323 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATAGCATGCAAAAGCTGTGTACCTCTCTGGAACCTTTCCTCCGCAAAGTT GTTGGTGAAGAGGTTGAACGAGCTCTGTCAAAATTCCCATCTTCAAAACTGEST: gi|169060337|gb|FE468921.1|FE468921
genomic: ATAGCATGCAAAAGCTGTGTACCTCTCTGGAACCTTTCCTCCGCAAAGTTgtgagtttct ... gtgagatcagGTTGGTGAAGAGGTTGAACGAGCTCTATCAAAATTCCCATCTTCAAAACTG
EST: ATAGCATGCAAAAGCTGTGTACCTCTCTGGAACCTTTCCTCCGCAAAGTT GTTGGTGAAGAGGTTGAACGAGCTCTATCAAAATTCCCATCTTCAAAACTG
genomic: ATAGCATGCAAAAGCTGTGTACCTCTCTGGAACCTTTCCTCCGCAAAGTTgtgagtttct ... gtgagatcagGTTGGTGAAGAGGTTGAACGAGCTCTATCAAAATTCCCATCTTCAAAACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTCATATTCGAAGCTGTGAAGATGGATAGCATGCAAAAGCTGTGTACCTCTCTGGAACCTTTCCTCCGCAAAGTTgtgagtttctttcttttttctgtttcgatgccttgacatcaaagtttttttttcctttcttctgtgagatcag
- - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG