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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTCGTCCCGTTCTCTAGGATGATCGCAGCCGATGTGAGCGAGGCCCGGCGCCGCGTGTTTGAGCAATTGGGCGTCAAAACTGTTGAATCCAACCATGAGgtaagctacattttcccttccctctccagattggacgggattctatctctgatcag

Basic information

species Selaginella moellendorffii
transcript EFJ11247
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169101732|gb|FE501237.1|FE501237
EST:     GAATCCAACCATGAG                         GTTGCGAGCAGCAGCGATGTCATAATTCTCGCAGTGAAGCCCCAGATTG
genomic: GAATCCAACCATGAGgtaagctaca ... ctctgatcagGTTGCGAGCAGCAGCGATGTCATAATTCTCGCAGTGAAGCCCCAGATTG
EST: gi|169101733|gb|FE501238.1|FE501238
EST:     GCCGCGTGTTTGAGCAATTGGGCGTCAAAACTGTTGAATCCAACCATGAG                         GTTGCGAGCAGCAGCGATGTCATAATTCTCGCAGTGAAGCCCCAGATTG
genomic: GCCGCGTGTTTGAGCAATTGGGCGTCAAAACTGTTGAATCCAACCATGAGgtaagctaca ... ctctgatcagGTTGCGAGCAGCAGCGATGTCATAATTCTCGCAGTGAAGCCCCAGATTG