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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacaaatgcattctttccatcccttgctatagaggatgacctccaagagttatcttcatcagcttcacataaacaggtatgaaaaaaaacatgtattaaatttaatatttcccagttttgaacactattcagGTTTGCCCTCTTTCTCTTATGGGAAGTGTTAGCAACATGGTAATAGTTATTGGGGACTACTTTCAACTTTCCAACAAT

Basic information

species Selaginella moellendorffii
transcript EFJ11240
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatgaaaaaaaacatgtattaaatttaatatttcccagttttgaacactattcagGTTTGCCCTCTTTCTCTTATGGGAAGTGTTAGCAACATGGTAATAGTTATTGGGGACTACTTTCAACTTTCCAACAAT
                      atttaat  putative branch site (score: 4)
     aaaaaaacatgtatta  TA-rich tract