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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCTCAAGCTGCGGATCCCGGATTCATCCACATGACTCCCGGAGTGCAGATGAGCGCCGGGGGCGATGATCTTGGGCAGCAGTACAACACTCCTGAAAATgtaagagttttcttctgtttgctcgttcgtttcttctgttttgttcgtccgtttcttctctttgctcgatcgttgcttctctttgctcgttcggttcttctctttgctcgtttgtttcttctcttttgttcgttgatttgctaatcttcctgtggatgttatag

Basic information

species Selaginella moellendorffii
transcript EFJ07704
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169044949|gb|FE452730.1|FE452730
EST:     TGAGCGCCGGGGGCGATGATCTTGGGCAGCAGTACAACACTCCTGAAAAT                         GTGATTGCTGACCGACAGAGTGATATAATCATCGTTGGTAGGGGAATTATC
genomic: TGAGCGCCGGGGGCGATGATCTTGGGCAGCAGTACAACACTCCTGAAAATgtaagagttt ... gatgttatagGTGATTGCTGACCGACAGAGTGATATAATCATCGTTGGTAGGGGAATTATC
EST: gi|169044948|gb|FE452729.1|FE452729
EST:     TGAGCGCCGGGGGCGATGATCTTGGGCAGCAGTACAACACTCCTGAAAAT                         GTGATTGCTGACCGACAGAGTGATATAATCATCGTTGGTAGGGGAATTATC
genomic: TGAGCGCCGGGGGCGATGATCTTGGGCAGCAGTACAACACTCCTGAAAATgtaagagttt ... gatgttatagGTGATTGCTGACCGACAGAGTGATATAATCATCGTTGGTAGGGGAATTATC